Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 C18orf15-201ENST00000623680 2534 ntBASIC14.14□□□□□ -0.15
SUMO3P55854 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
SUMO3P55854 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.14□□□□□ -0.15
SUMO3P55854 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.14□□□□□ -0.15
SUMO3P55854 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
SUMO3P55854 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
SUMO3P55854 PPT1-215ENST00000641471 2368 ntBASIC14.14□□□□□ -0.15
SUMO3P55854 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 GHSR-202ENST00000427970 912 ntBASIC14.13□□□□□ -0.15
SUMO3P55854 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.13□□□□□ -0.15
SUMO3P55854 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 AC104596.2-201ENST00000512793 793 ntBASIC14.13□□□□□ -0.15
SUMO3P55854 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.13□□□□□ -0.15
SUMO3P55854 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.13□□□□□ -0.15
SUMO3P55854 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.13□□□□□ -0.15
SUMO3P55854 LINC02560-201ENST00000596379 459 ntBASIC14.13□□□□□ -0.15
SUMO3P55854 AC093726.1-201ENST00000608064 963 ntBASIC14.13□□□□□ -0.15
SUMO3P55854 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.13□□□□□ -0.15
SUMO3P55854 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
SUMO3P55854 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
SUMO3P55854 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
SUMO3P55854 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC14.13□□□□□ -0.15
SUMO3P55854 AC126177.1-201ENST00000547829 2218 ntBASIC14.13□□□□□ -0.15
SUMO3P55854 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.13□□□□□ -0.15
SUMO3P55854 AC092384.3-202ENST00000564646 2873 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 CLK3P2-201ENST00000427566 1453 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 AC104640.1-201ENST00000562617 2109 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 AC132872.4-202ENST00000622924 2756 ntBASIC14.12□□□□□ -0.15
SUMO3P55854 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.12□□□□□ -0.15
SUMO3P55854 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
SUMO3P55854 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SUMO3P55854 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms