Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.07■□□□□ 0.64
NUP98P52948 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 HLA-DPB2-205ENST00000435074 1188 ntBASIC19.07■□□□□ 0.64
NUP98P52948 SPTLC1P5-201ENST00000450718 252 ntBASIC19.07■□□□□ 0.64
NUP98P52948 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC19.07■□□□□ 0.64
NUP98P52948 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 AC026740.1-201ENST00000607068 791 ntBASIC19.07■□□□□ 0.64
NUP98P52948 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC19.07■□□□□ 0.64
NUP98P52948 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NUP98P52948 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP98P52948 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NUP98P52948 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NUP98P52948 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
NUP98P52948 AL139384.1-201ENST00000612143 3047 ntBASIC19.06■□□□□ 0.64
NUP98P52948 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
NUP98P52948 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NUP98P52948 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 FNTAP2-201ENST00000430308 634 ntBASIC19.06■□□□□ 0.64
NUP98P52948 UPF3AP2-201ENST00000457924 1132 ntBASIC19.06■□□□□ 0.64
NUP98P52948 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC19.06■□□□□ 0.64
NUP98P52948 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC19.06■□□□□ 0.64
NUP98P52948 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC19.06■□□□□ 0.64
NUP98P52948 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC19.06■□□□□ 0.64
NUP98P52948 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.06■□□□□ 0.64
NUP98P52948 AC091812.3-201ENST00000621362 345 ntBASIC19.06■□□□□ 0.64
NUP98P52948 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC19.06■□□□□ 0.64
NUP98P52948 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
NUP98P52948 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 AL391005.1-201ENST00000623953 2435 ntBASIC19.05■□□□□ 0.64
NUP98P52948 AL359258.3-201ENST00000622910 2331 ntBASIC19.05■□□□□ 0.64
NUP98P52948 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC19.05■□□□□ 0.64
NUP98P52948 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.05■□□□□ 0.64
NUP98P52948 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NUP98P52948 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
NUP98P52948 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NUP98P52948 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC19.04■□□□□ 0.64
NUP98P52948 RBM38-204ENST00000371219 760 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 CYP46A4P-201ENST00000414953 267 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC19.04■□□□□ 0.64
NUP98P52948 RNMTL1P1-201ENST00000454103 560 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AC015967.2-201ENST00000624092 234 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AC006435.4-201ENST00000625037 234 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AL356737.1-201ENST00000634391 234 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP98P52948 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP98P52948 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP98P52948 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP98P52948 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.04■□□□□ 0.64
NUP98P52948 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 MARK2P5-201ENST00000507649 634 ntBASIC19.04■□□□□ 0.64
NUP98P52948 AL160314.3-201ENST00000556041 767 ntBASIC19.04■□□□□ 0.64
NUP98P52948 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
NUP98P52948 AC132192.2-201ENST00000596206 1147 ntBASIC19.04■□□□□ 0.64
NUP98P52948 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC19.04■□□□□ 0.64
NUP98P52948 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.9 ms