Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC004840.1-201ENST00000636359 365 ntBASIC15.08■□□□□ 0
SLC6A12P48065 AL645728.2-202ENST00000641679 227 ntBASIC15.08■□□□□ 0
SLC6A12P48065 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
SLC6A12P48065 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC15.08■□□□□ 0
SLC6A12P48065 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.08■□□□□ 0
SLC6A12P48065 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
SLC6A12P48065 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
SLC6A12P48065 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
SLC6A12P48065 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A12P48065 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.07■□□□□ 0
SLC6A12P48065 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 AC022144.1-201ENST00000602255 1580 ntBASIC15.07■□□□□ 0
SLC6A12P48065 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.07■□□□□ 0
SLC6A12P48065 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A12P48065 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.07■□□□□ 0
SLC6A12P48065 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC15.07■□□□□ 0
SLC6A12P48065 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.07■□□□□ 0
SLC6A12P48065 RFPL4AP1-201ENST00000530883 850 ntBASIC15.07■□□□□ 0
SLC6A12P48065 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 TIMM17BP1-201ENST00000545713 516 ntBASIC15.07■□□□□ 0
SLC6A12P48065 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC15.07■□□□□ 0
SLC6A12P48065 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.07■□□□□ 0
SLC6A12P48065 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 AL158212.4-201ENST00000624062 1286 ntBASIC15.07■□□□□ 0
SLC6A12P48065 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.07■□□□□ 0
SLC6A12P48065 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
SLC6A12P48065 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A12P48065 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.06■□□□□ 0
SLC6A12P48065 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A12P48065 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.06■□□□□ 0
SLC6A12P48065 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 AC104457.1-201ENST00000401024 814 ntBASIC15.06■□□□□ 0
SLC6A12P48065 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.06■□□□□ 0
SLC6A12P48065 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 MRPS18AP1-201ENST00000414458 589 ntBASIC15.06■□□□□ 0
SLC6A12P48065 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.06■□□□□ 0
SLC6A12P48065 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.06■□□□□ 0
SLC6A12P48065 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.06■□□□□ 0
SLC6A12P48065 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A12P48065 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.06■□□□□ 0
SLC6A12P48065 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A12P48065 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.06■□□□□ 0
SLC6A12P48065 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.06■□□□□ 0
SLC6A12P48065 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
SLC6A12P48065 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.05■□□□□ 0
SLC6A12P48065 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms