Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL15A1P39059 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
COL15A1P39059 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
COL15A1P39059 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 SNX21-203ENST00000372541 771 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
COL15A1P39059 FNTAP2-201ENST00000430308 634 ntBASIC19.58■□□□□ 0.73
COL15A1P39059 PTPA-218ENST00000435132 618 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 POM121L10P-201ENST00000436994 1285 ntBASIC19.58■□□□□ 0.73
COL15A1P39059 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC19.58■□□□□ 0.73
COL15A1P39059 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 PRSS30P-206ENST00000641773 873 ntBASIC19.58■□□□□ 0.73
COL15A1P39059 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
COL15A1P39059 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC19.58■□□□□ 0.73
COL15A1P39059 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.58■□□□□ 0.73
COL15A1P39059 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL15A1P39059 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 TKT-202ENST00000423516 2075 ntTSL 2 BASIC19.58■□□□□ 0.72
COL15A1P39059 AL365203.3-201ENST00000609742 2057 ntBASIC19.58■□□□□ 0.72
COL15A1P39059 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
COL15A1P39059 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL15A1P39059 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 TPM3P8-201ENST00000330554 643 ntBASIC19.57■□□□□ 0.72
COL15A1P39059 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 AL451050.2-201ENST00000606967 682 ntBASIC19.57■□□□□ 0.72
COL15A1P39059 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC19.57■□□□□ 0.72
COL15A1P39059 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL15A1P39059 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
COL15A1P39059 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
COL15A1P39059 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
COL15A1P39059 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL15A1P39059 AC079178.1-201ENST00000420915 656 ntBASIC19.57■□□□□ 0.72
COL15A1P39059 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 COG4-212ENST00000564653 590 ntTSL 5 BASIC19.57■□□□□ 0.72
COL15A1P39059 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC19.57■□□□□ 0.72
COL15A1P39059 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC19.57■□□□□ 0.72
COL15A1P39059 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 ENPP7P14-201ENST00000621765 1040 ntBASIC19.57■□□□□ 0.72
COL15A1P39059 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC19.57■□□□□ 0.72
COL15A1P39059 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC19.56■□□□□ 0.72
COL15A1P39059 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL15A1P39059 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.56■□□□□ 0.72
COL15A1P39059 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL15A1P39059 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
COL15A1P39059 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms