Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.99□□□□□ -0.01
KRT20P35900 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
KRT20P35900 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
KRT20P35900 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT20P35900 HAUS4P1-201ENST00000406739 1145 ntBASIC14.98□□□□□ -0.01
KRT20P35900 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 TSEN15P1-201ENST00000423257 515 ntBASIC14.98□□□□□ -0.01
KRT20P35900 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.98□□□□□ -0.01
KRT20P35900 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT20P35900 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT20P35900 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
KRT20P35900 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC14.98□□□□□ -0.01
KRT20P35900 AP001160.2-201ENST00000596071 487 ntBASIC14.98□□□□□ -0.01
KRT20P35900 AC006538.3-201ENST00000612495 578 ntBASIC14.98□□□□□ -0.01
KRT20P35900 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 AC138035.3-201ENST00000622706 2791 ntBASIC14.98□□□□□ -0.01
KRT20P35900 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
KRT20P35900 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.98□□□□□ -0.01
KRT20P35900 TMBIM7P-203ENST00000641617 1718 ntBASIC14.97□□□□□ -0.01
KRT20P35900 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 FOXO1B-201ENST00000504678 1527 ntBASIC14.97□□□□□ -0.01
KRT20P35900 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.97□□□□□ -0.01
KRT20P35900 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KRT20P35900 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.97□□□□□ -0.01
KRT20P35900 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 FAM58DP-201ENST00000428076 619 ntBASIC14.97□□□□□ -0.01
KRT20P35900 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
KRT20P35900 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.97□□□□□ -0.01
KRT20P35900 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.97□□□□□ -0.01
KRT20P35900 AC093520.2-201ENST00000561830 333 ntBASIC14.97□□□□□ -0.01
KRT20P35900 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.97□□□□□ -0.01
KRT20P35900 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.97□□□□□ -0.01
KRT20P35900 AC003101.2-201ENST00000612557 442 ntBASIC14.97□□□□□ -0.01
KRT20P35900 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 MIR6080-201ENST00000617359 66 ntBASIC14.97□□□□□ -0.01
KRT20P35900 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.97□□□□□ -0.01
KRT20P35900 SNX18-202ENST00000343017 3140 ntBASIC14.97□□□□□ -0.01
KRT20P35900 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KRT20P35900 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
KRT20P35900 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
KRT20P35900 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.97□□□□□ -0.01
KRT20P35900 AC067750.1-201ENST00000608826 6545 ntBASIC14.97□□□□□ -0.01
KRT20P35900 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.97□□□□□ -0.01
KRT20P35900 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
KRT20P35900 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT20P35900 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.96□□□□□ -0.01
KRT20P35900 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.96□□□□□ -0.01
KRT20P35900 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.96□□□□□ -0.01
KRT20P35900 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.96□□□□□ -0.01
KRT20P35900 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
KRT20P35900 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms