Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 RN7SKP175-201ENST00000408472 289 ntBASIC20.73■□□□□ 0.91
USP6P35125 CYP46A4P-201ENST00000414953 267 ntBASIC20.73■□□□□ 0.91
USP6P35125 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6P35125 UPF3AP2-201ENST00000457924 1132 ntBASIC20.73■□□□□ 0.91
USP6P35125 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC20.73■□□□□ 0.91
USP6P35125 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC20.73■□□□□ 0.91
USP6P35125 AC097724.1-201ENST00000609581 426 ntBASIC20.73■□□□□ 0.91
USP6P35125 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.73■□□□□ 0.91
USP6P35125 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6P35125 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6P35125 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6P35125 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6P35125 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6P35125 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6P35125 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
USP6P35125 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6P35125 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 AC026434.2-201ENST00000506094 1078 ntBASIC20.72■□□□□ 0.91
USP6P35125 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
USP6P35125 AC016629.1-201ENST00000596579 586 ntBASIC20.72■□□□□ 0.91
USP6P35125 AP001505.2-201ENST00000616815 443 ntBASIC20.72■□□□□ 0.91
USP6P35125 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
USP6P35125 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC20.72■□□□□ 0.91
USP6P35125 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
USP6P35125 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC20.72■□□□□ 0.91
USP6P35125 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC20.72■□□□□ 0.91
USP6P35125 REXO1L5P-201ENST00000622260 2098 ntBASIC20.72■□□□□ 0.91
USP6P35125 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
USP6P35125 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC20.71■□□□□ 0.91
USP6P35125 AL157414.3-201ENST00000624276 1954 ntBASIC20.71■□□□□ 0.91
USP6P35125 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20.71■□□□□ 0.91
USP6P35125 IMP3P2-201ENST00000489760 475 ntBASIC20.71■□□□□ 0.91
USP6P35125 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC20.71■□□□□ 0.91
USP6P35125 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC20.71■□□□□ 0.91
USP6P35125 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 RN7SL190P-201ENST00000582519 257 ntBASIC20.71■□□□□ 0.91
USP6P35125 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
USP6P35125 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20.71■□□□□ 0.91
USP6P35125 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP6P35125 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
USP6P35125 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
USP6P35125 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC20.71■□□□□ 0.91
USP6P35125 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
USP6P35125 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
USP6P35125 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
USP6P35125 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 GHSR-202ENST00000427970 912 ntBASIC20.7■□□□□ 0.9
USP6P35125 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
USP6P35125 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC20.7■□□□□ 0.9
USP6P35125 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 FOS-206ENST00000555347 1280 ntTSL 2 BASIC20.7■□□□□ 0.9
USP6P35125 AC079328.1-201ENST00000560358 952 ntBASIC20.7■□□□□ 0.9
USP6P35125 AC013355.1-201ENST00000562625 723 ntBASIC20.7■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms