Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
SLC6A4P31645 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16■□□□□ 0.15
SLC6A4P31645 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
SLC6A4P31645 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 USP32P1-208ENST00000506594 1164 ntBASIC15.99■□□□□ 0.15
SLC6A4P31645 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
SLC6A4P31645 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC15.99■□□□□ 0.15
SLC6A4P31645 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SLC6A4P31645 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SLC6A4P31645 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
SLC6A4P31645 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC6A4P31645 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 MSTO2P-201ENST00000314835 1709 ntBASIC15.98■□□□□ 0.15
SLC6A4P31645 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A4P31645 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
SLC6A4P31645 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC079776.1-201ENST00000401540 1152 ntBASIC15.98■□□□□ 0.15
SLC6A4P31645 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC6A4P31645 ACTG1P3-201ENST00000431775 1114 ntBASIC15.98■□□□□ 0.15
SLC6A4P31645 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.98■□□□□ 0.15
SLC6A4P31645 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 ENPP7P5-201ENST00000541031 1031 ntBASIC15.98■□□□□ 0.15
SLC6A4P31645 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A4P31645 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.98■□□□□ 0.15
SLC6A4P31645 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.98■□□□□ 0.15
SLC6A4P31645 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.98■□□□□ 0.15
SLC6A4P31645 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 AC132872.4-202ENST00000622924 2756 ntBASIC15.98■□□□□ 0.15
SLC6A4P31645 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
SLC6A4P31645 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.97■□□□□ 0.15
SLC6A4P31645 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC6A4P31645 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms