Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.88□□□□□ -0.03
MMP11P24347 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP11P24347 INE1-201ENST00000456273 945 ntBASIC14.88□□□□□ -0.03
MMP11P24347 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP11P24347 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
MMP11P24347 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14.88□□□□□ -0.03
MMP11P24347 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
MMP11P24347 SSR4P1-203ENST00000599569 2260 ntBASIC14.88□□□□□ -0.03
MMP11P24347 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
MMP11P24347 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.88□□□□□ -0.03
MMP11P24347 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
MMP11P24347 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.88□□□□□ -0.03
MMP11P24347 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
MMP11P24347 AC092850.2-201ENST00000623821 2697 ntBASIC14.88□□□□□ -0.03
MMP11P24347 AC068418.2-201ENST00000577309 3703 ntBASIC14.88□□□□□ -0.03
MMP11P24347 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
MMP11P24347 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
MMP11P24347 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 OR8S1-201ENST00000310194 1080 ntBASIC14.87□□□□□ -0.03
MMP11P24347 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 AL512384.1-201ENST00000406683 331 ntBASIC14.87□□□□□ -0.03
MMP11P24347 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP11P24347 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.87□□□□□ -0.03
MMP11P24347 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.87□□□□□ -0.03
MMP11P24347 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.87□□□□□ -0.03
MMP11P24347 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
MMP11P24347 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
MMP11P24347 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
MMP11P24347 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 AC136621.1-201ENST00000624017 2304 ntBASIC14.87□□□□□ -0.03
MMP11P24347 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
MMP11P24347 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.86□□□□□ -0.03
MMP11P24347 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 RPL13P2-201ENST00000440687 659 ntBASIC14.86□□□□□ -0.03
MMP11P24347 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.86□□□□□ -0.03
MMP11P24347 ELK1P1-201ENST00000485699 580 ntBASIC14.86□□□□□ -0.03
MMP11P24347 GIMAP3P-201ENST00000495150 836 ntBASIC14.86□□□□□ -0.03
MMP11P24347 AC104596.2-201ENST00000512793 793 ntBASIC14.86□□□□□ -0.03
MMP11P24347 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MMP11P24347 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.86□□□□□ -0.03
MMP11P24347 TMEM261P1-201ENST00000604899 340 ntBASIC14.86□□□□□ -0.03
MMP11P24347 LINC01115-203ENST00000606068 577 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms