Protein–RNA interactions for Protein: P23229

ITGA6, Integrin alpha-6, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6P23229 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
ITGA6P23229 GUK1-206ENST00000366723 845 ntTSL 5 BASIC19.12■□□□□ 0.65
ITGA6P23229 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
ITGA6P23229 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.12■□□□□ 0.65
ITGA6P23229 ACTBP8-201ENST00000403258 1108 ntBASIC19.12■□□□□ 0.65
ITGA6P23229 AL355994.2-201ENST00000447882 704 ntBASIC19.12■□□□□ 0.65
ITGA6P23229 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.12■□□□□ 0.65
ITGA6P23229 AC022494.1-201ENST00000466044 728 ntBASIC19.12■□□□□ 0.65
ITGA6P23229 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.12■□□□□ 0.65
ITGA6P23229 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
ITGA6P23229 AC078819.1-201ENST00000547454 765 ntBASIC19.12■□□□□ 0.65
ITGA6P23229 AC012085.1-201ENST00000548270 765 ntBASIC19.12■□□□□ 0.65
ITGA6P23229 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC19.12■□□□□ 0.65
ITGA6P23229 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.12■□□□□ 0.65
ITGA6P23229 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.12■□□□□ 0.65
ITGA6P23229 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
ITGA6P23229 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
ITGA6P23229 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC19.12■□□□□ 0.65
ITGA6P23229 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 PCDHA1-201ENST00000378133 2726 ntBASIC19.11■□□□□ 0.65
ITGA6P23229 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 TPO-206ENST00000382269 1155 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 AC114812.1-204ENST00000449669 728 ntBASIC19.11■□□□□ 0.65
ITGA6P23229 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 AC008687.7-202ENST00000637404 953 ntBASIC19.11■□□□□ 0.65
ITGA6P23229 PRSS30P-206ENST00000641773 873 ntBASIC19.11■□□□□ 0.65
ITGA6P23229 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 AC026691.1-201ENST00000602502 2017 ntBASIC19.11■□□□□ 0.65
ITGA6P23229 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
ITGA6P23229 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
ITGA6P23229 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.11■□□□□ 0.65
ITGA6P23229 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
ITGA6P23229 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 AC007787.1-201ENST00000588095 1583 ntBASIC19.1■□□□□ 0.65
ITGA6P23229 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA6P23229 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 AP005117.1-202ENST00000581724 1908 ntBASIC19.1■□□□□ 0.65
ITGA6P23229 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 AC006001.1-201ENST00000325130 474 ntBASIC19.1■□□□□ 0.65
ITGA6P23229 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA6P23229 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 YBX1P6-201ENST00000442962 1002 ntBASIC19.1■□□□□ 0.65
ITGA6P23229 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC19.1■□□□□ 0.65
ITGA6P23229 MDH2-205ENST00000461263 648 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 USB1-203ENST00000539737 1212 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC19.1■□□□□ 0.65
ITGA6P23229 AC009542.2-202ENST00000619004 1067 ntBASIC19.1■□□□□ 0.65
ITGA6P23229 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC19.1■□□□□ 0.65
ITGA6P23229 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
ITGA6P23229 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.1■□□□□ 0.65
ITGA6P23229 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
ITGA6P23229 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC19.1■□□□□ 0.65
ITGA6P23229 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
ITGA6P23229 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA6P23229 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC19.09■□□□□ 0.65
ITGA6P23229 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.09■□□□□ 0.65
ITGA6P23229 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA6P23229 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA6P23229 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
ITGA6P23229 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms