Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ACE3P-201ENST00000423435 1973 ntBASIC13.47□□□□□ -0.25
CCL1P22362 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 GRAMD4P3-201ENST00000621665 1669 ntBASIC13.47□□□□□ -0.25
CCL1P22362 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CCL1P22362 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CCL1P22362 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
CCL1P22362 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.46□□□□□ -0.25
CCL1P22362 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.46□□□□□ -0.25
CCL1P22362 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
CCL1P22362 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.46□□□□□ -0.25
CCL1P22362 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 REXO1L2P-201ENST00000425429 2069 ntBASIC13.46□□□□□ -0.25
CCL1P22362 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL1P22362 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 AC254562.1-201ENST00000417586 456 ntBASIC13.46□□□□□ -0.25
CCL1P22362 AC015922.1-201ENST00000421102 1152 ntBASIC13.46□□□□□ -0.25
CCL1P22362 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 AP000347.1-202ENST00000435868 847 ntBASIC13.46□□□□□ -0.25
CCL1P22362 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.46□□□□□ -0.25
CCL1P22362 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.46□□□□□ -0.25
CCL1P22362 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 LINC00628-201ENST00000628516 1289 ntBASIC13.46□□□□□ -0.25
CCL1P22362 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.46□□□□□ -0.25
CCL1P22362 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.46□□□□□ -0.25
CCL1P22362 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CCL1P22362 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL1P22362 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.46□□□□□ -0.26
CCL1P22362 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL1P22362 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL1P22362 PKD1P5-201ENST00000532415 10291 ntBASIC13.46□□□□□ -0.26
CCL1P22362 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
CCL1P22362 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.46□□□□□ -0.26
CCL1P22362 AC106881.1-201ENST00000605849 3329 ntBASIC13.46□□□□□ -0.26
CCL1P22362 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
CCL1P22362 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.46□□□□□ -0.26
CCL1P22362 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.45□□□□□ -0.26
CCL1P22362 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 AC211486.1-202ENST00000416371 468 ntBASIC13.45□□□□□ -0.26
CCL1P22362 KRT18P64-201ENST00000434946 1219 ntBASIC13.45□□□□□ -0.26
CCL1P22362 AP006288.1-201ENST00000446065 395 ntBASIC13.45□□□□□ -0.26
CCL1P22362 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 HLA-V-204ENST00000476601 1289 ntBASIC13.45□□□□□ -0.26
CCL1P22362 AC211476.1-201ENST00000503899 468 ntBASIC13.45□□□□□ -0.26
CCL1P22362 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.45□□□□□ -0.26
CCL1P22362 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms