Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD53P19397 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD53P19397 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CD53P19397 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.31□□□□□ -0.12
CD53P19397 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD53P19397 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CD53P19397 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CD53P19397 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 AL009178.2-201ENST00000597278 2719 ntBASIC14.3□□□□□ -0.12
CD53P19397 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 PIN1P1-201ENST00000412108 996 ntBASIC14.3□□□□□ -0.12
CD53P19397 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.3□□□□□ -0.12
CD53P19397 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.3□□□□□ -0.12
CD53P19397 MEIS3P1-201ENST00000495167 958 ntBASIC14.3□□□□□ -0.12
CD53P19397 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.3□□□□□ -0.12
CD53P19397 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.3□□□□□ -0.12
CD53P19397 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 AL365330.1-201ENST00000607459 531 ntBASIC14.3□□□□□ -0.12
CD53P19397 AL662799.1-202ENST00000614205 422 ntBASIC14.3□□□□□ -0.12
CD53P19397 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CD53P19397 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CD53P19397 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CD53P19397 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.29□□□□□ -0.12
CD53P19397 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.29□□□□□ -0.12
CD53P19397 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.29□□□□□ -0.12
CD53P19397 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 OR8S1-201ENST00000310194 1080 ntBASIC14.29□□□□□ -0.12
CD53P19397 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CD53P19397 MRPS18AP1-201ENST00000414458 589 ntBASIC14.29□□□□□ -0.12
CD53P19397 NME2P1-201ENST00000426182 414 ntBASIC14.29□□□□□ -0.12
CD53P19397 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.29□□□□□ -0.12
CD53P19397 AC007274.1-201ENST00000439805 662 ntBASIC14.29□□□□□ -0.12
CD53P19397 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.29□□□□□ -0.12
CD53P19397 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.29□□□□□ -0.12
CD53P19397 AL031055.1-201ENST00000606362 631 ntBASIC14.29□□□□□ -0.12
CD53P19397 AC009118.2-201ENST00000613275 655 ntBASIC14.29□□□□□ -0.12
CD53P19397 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.29□□□□□ -0.12
CD53P19397 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CD53P19397 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CD53P19397 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms