Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 EIF4HP1-201ENST00000453115 687 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC17.42■□□□□ 0.38
COL11A1P12107 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC17.42■□□□□ 0.38
COL11A1P12107 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.42■□□□□ 0.38
COL11A1P12107 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
COL11A1P12107 AC104982.3-201ENST00000581995 514 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.42■□□□□ 0.38
COL11A1P12107 KRT8P4-201ENST00000509735 1454 ntBASIC17.42■□□□□ 0.38
COL11A1P12107 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.42■□□□□ 0.38
COL11A1P12107 AC026691.1-201ENST00000602502 2017 ntBASIC17.41■□□□□ 0.38
COL11A1P12107 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.41■□□□□ 0.38
COL11A1P12107 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 REXO1L5P-201ENST00000622260 2098 ntBASIC17.41■□□□□ 0.38
COL11A1P12107 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.41■□□□□ 0.38
COL11A1P12107 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.41■□□□□ 0.38
COL11A1P12107 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 TSACC-208ENST00000481479 741 ntTSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.41■□□□□ 0.38
COL11A1P12107 AP001258.2-201ENST00000529891 490 ntBASIC17.41■□□□□ 0.38
COL11A1P12107 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.41■□□□□ 0.38
COL11A1P12107 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.41■□□□□ 0.38
COL11A1P12107 RN7SL574P-201ENST00000581512 297 ntBASIC17.41■□□□□ 0.38
COL11A1P12107 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.41■□□□□ 0.38
COL11A1P12107 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.41■□□□□ 0.38
COL11A1P12107 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.41■□□□□ 0.38
COL11A1P12107 INE2-201ENST00000630399 1874 ntBASIC17.41■□□□□ 0.38
COL11A1P12107 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
COL11A1P12107 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
COL11A1P12107 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.4■□□□□ 0.38
COL11A1P12107 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.4■□□□□ 0.38
COL11A1P12107 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC17.4■□□□□ 0.38
COL11A1P12107 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.4■□□□□ 0.38
COL11A1P12107 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.4■□□□□ 0.38
COL11A1P12107 CICP11-201ENST00000434745 2827 ntBASIC17.4■□□□□ 0.38
COL11A1P12107 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 AP005117.1-202ENST00000581724 1908 ntBASIC17.4■□□□□ 0.38
COL11A1P12107 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.4■□□□□ 0.38
COL11A1P12107 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
COL11A1P12107 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC17.4■□□□□ 0.38
COL11A1P12107 MESTP3-201ENST00000503460 968 ntBASIC17.4■□□□□ 0.38
COL11A1P12107 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
COL11A1P12107 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC17.4■□□□□ 0.38
COL11A1P12107 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.39■□□□□ 0.37
COL11A1P12107 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.39■□□□□ 0.37
COL11A1P12107 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
COL11A1P12107 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
COL11A1P12107 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.39■□□□□ 0.37
COL11A1P12107 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms