Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
UBL4AP11441 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.57□□□□□ -0.08
UBL4AP11441 AC125807.1-201ENST00000483097 614 ntBASIC14.57□□□□□ -0.08
UBL4AP11441 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL4AP11441 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL4AP11441 AL079307.3-201ENST00000556114 283 ntBASIC14.57□□□□□ -0.08
UBL4AP11441 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.57□□□□□ -0.08
UBL4AP11441 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL4AP11441 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.57□□□□□ -0.08
UBL4AP11441 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.57□□□□□ -0.08
UBL4AP11441 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
UBL4AP11441 KRT8P12-202ENST00000472924 1397 ntBASIC14.57□□□□□ -0.08
UBL4AP11441 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
UBL4AP11441 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 AC026748.1-201ENST00000624349 3251 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 FO393414.2-201ENST00000405153 598 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.56□□□□□ -0.08
UBL4AP11441 MIR4313-201ENST00000580760 101 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 AC093028.1-201ENST00000622998 982 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 TUBB3P1-201ENST00000405796 1332 ntBASIC14.56□□□□□ -0.08
UBL4AP11441 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
UBL4AP11441 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
UBL4AP11441 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 Z99774.1-201ENST00000382641 2613 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
UBL4AP11441 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.56□□□□□ -0.08
UBL4AP11441 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBL4AP11441 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL4AP11441 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
UBL4AP11441 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.55□□□□□ -0.08
UBL4AP11441 AC107918.4-201ENST00000641966 3141 ntBASIC14.55□□□□□ -0.08
UBL4AP11441 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL4AP11441 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.55□□□□□ -0.08
UBL4AP11441 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
UBL4AP11441 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
UBL4AP11441 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.55□□□□□ -0.08
UBL4AP11441 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
UBL4AP11441 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.55□□□□□ -0.08
UBL4AP11441 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.55□□□□□ -0.08
UBL4AP11441 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
UBL4AP11441 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms