Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 ENPP7P14-201ENST00000621765 1040 ntBASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CSB-PGBD3P0DP91 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC022211.2-201ENST00000585075 2527 ntBASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 GGCT-203ENST00000409144 836 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC079178.1-201ENST00000420915 656 ntBASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC007663.3-201ENST00000609632 465 ntBASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC138627.1-207ENST00000641560 1006 ntBASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.55■□□□□ 0.88
CSB-PGBD3P0DP91 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RPS15-201ENST00000233609 534 ntTSL 2 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 KRTAP19-9P-201ENST00000421795 191 ntBASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 FAM8A4P-201ENST00000435433 1213 ntBASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RNF41-210ENST00000552244 716 ntTSL 3 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RPS15-205ENST00000586686 562 ntTSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RPS15-208ENST00000591804 711 ntTSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC20.54■□□□□ 0.88
CSB-PGBD3P0DP91 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 NDUFAB1P1-201ENST00000404262 460 ntBASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 HINT2P1-201ENST00000419438 481 ntBASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 TSACC-208ENST00000481479 741 ntTSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 COX5BP1-201ENST00000507622 393 ntBASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC20.53■□□□□ 0.88
CSB-PGBD3P0DP91 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms