Protein–RNA interactions for Protein: P0DP08

IGHV4-38-2, Immunoglobulin heavy variable 4-38-2, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-38-2P0DP08 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 ING5-213ENST00000636051 4199 ntTSL 5 BASIC12.59□□□□□ -0.39
IGHV4-38-2P0DP08 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 ACE-203ENST00000413513 2237 ntTSL 2 BASIC12.58□□□□□ -0.39
IGHV4-38-2P0DP08 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 ZBTB12BP-201ENST00000314232 1122 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 C2orf27AP3-201ENST00000434123 579 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 FO681548.1-201ENST00000455617 1132 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 KRT90P-201ENST00000549264 1064 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AL583810.1-201ENST00000553344 1045 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AC025181.2-201ENST00000606994 802 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AL354718.3-201ENST00000616414 581 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 GPR39-203ENST00000622084 900 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CR382287.1-201ENST00000623954 586 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 PRAL-201ENST00000624952 3286 ntBASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
IGHV4-38-2P0DP08 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
IGHV4-38-2P0DP08 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms