Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 AC099568.2-201ENST00000609194 695 ntBASIC15.7■□□□□ 0.1
MMP2P08253 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP2P08253 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP2P08253 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
MMP2P08253 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
MMP2P08253 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP2P08253 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP2P08253 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.7■□□□□ 0.1
MMP2P08253 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.7■□□□□ 0.1
MMP2P08253 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
MMP2P08253 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MMP2P08253 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MMP2P08253 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 AC098850.1-201ENST00000419919 790 ntBASIC15.69■□□□□ 0.1
MMP2P08253 MEP1AP4-201ENST00000423244 1087 ntBASIC15.69■□□□□ 0.1
MMP2P08253 OARD1-208ENST00000469104 704 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.69■□□□□ 0.1
MMP2P08253 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP2P08253 AC055876.2-201ENST00000531834 546 ntBASIC15.69■□□□□ 0.1
MMP2P08253 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.69■□□□□ 0.1
MMP2P08253 RRP7BP-205ENST00000566851 833 ntBASIC15.69■□□□□ 0.1
MMP2P08253 AC036164.1-201ENST00000570544 333 ntBASIC15.69■□□□□ 0.1
MMP2P08253 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.69■□□□□ 0.1
MMP2P08253 AL132655.2-201ENST00000596276 594 ntBASIC15.69■□□□□ 0.1
MMP2P08253 CHCHD2P3-201ENST00000603038 451 ntBASIC15.69■□□□□ 0.1
MMP2P08253 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC15.69■□□□□ 0.1
MMP2P08253 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
MMP2P08253 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC15.69■□□□□ 0.1
MMP2P08253 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
MMP2P08253 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.68■□□□□ 0.1
MMP2P08253 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP2P08253 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
MMP2P08253 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 AC007541.1-201ENST00000570282 1469 ntBASIC15.68■□□□□ 0.1
MMP2P08253 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.68■□□□□ 0.1
MMP2P08253 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
MMP2P08253 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MMP2P08253 DFFBP1-201ENST00000433250 979 ntBASIC15.68■□□□□ 0.1
MMP2P08253 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms