Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 PKIG-203ENST00000372887 769 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 BCRP1-201ENST00000444246 691 ntBASIC15.85■□□□□ 0.13
HLA-DQB2P05538 GNAQP1-201ENST00000444815 1067 ntBASIC15.85■□□□□ 0.13
HLA-DQB2P05538 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 DOC2GP-202ENST00000514950 1163 ntBASIC15.85■□□□□ 0.13
HLA-DQB2P05538 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 AJ011932.1-201ENST00000621707 465 ntBASIC15.85■□□□□ 0.13
HLA-DQB2P05538 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.85■□□□□ 0.13
HLA-DQB2P05538 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 DBET-201ENST00000630918 3363 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 SPDYE19P-201ENST00000338590 713 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MIR661-201ENST00000384842 89 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC023310.3-201ENST00000557027 670 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 SPCS2P1-201ENST00000561636 679 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC100756.1-201ENST00000562736 682 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC138749.3-201ENST00000567691 622 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 AC116165.1-201ENST00000611806 668 ntBASIC15.84■□□□□ 0.13
HLA-DQB2P05538 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
HLA-DQB2P05538 CLK3P2-201ENST00000427566 1453 ntBASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms