Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APPP05067 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.82■□□□□ 0.6
APPP05067 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.82■□□□□ 0.6
APPP05067 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
APPP05067 SLC7A15P-201ENST00000424028 1363 ntBASIC18.81■□□□□ 0.6
APPP05067 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
APPP05067 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.81■□□□□ 0.6
APPP05067 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.81■□□□□ 0.6
APPP05067 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC18.81■□□□□ 0.6
APPP05067 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
APPP05067 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 AL035633.1-201ENST00000406139 838 ntBASIC18.81■□□□□ 0.6
APPP05067 MEP1AP4-201ENST00000423244 1087 ntBASIC18.81■□□□□ 0.6
APPP05067 CRB3P1-201ENST00000449338 276 ntBASIC18.81■□□□□ 0.6
APPP05067 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.81■□□□□ 0.6
APPP05067 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.81■□□□□ 0.6
APPP05067 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.81■□□□□ 0.6
APPP05067 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC18.81■□□□□ 0.6
APPP05067 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.81■□□□□ 0.6
APPP05067 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
APPP05067 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC18.81■□□□□ 0.6
APPP05067 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC18.81■□□□□ 0.6
APPP05067 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.81■□□□□ 0.6
APPP05067 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APPP05067 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
APPP05067 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
APPP05067 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
APPP05067 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 AC087499.6-201ENST00000411576 835 ntBASIC18.8■□□□□ 0.6
APPP05067 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
APPP05067 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC18.8■□□□□ 0.6
APPP05067 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.8■□□□□ 0.6
APPP05067 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC18.8■□□□□ 0.6
APPP05067 COX20P2-201ENST00000452636 358 ntBASIC18.8■□□□□ 0.6
APPP05067 API5-211ENST00000534695 560 ntTSL 5 BASIC18.8■□□□□ 0.6
APPP05067 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.8■□□□□ 0.6
APPP05067 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
APPP05067 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 CHCHD2P3-201ENST00000603038 451 ntBASIC18.8■□□□□ 0.6
APPP05067 AL662799.1-202ENST00000614205 422 ntBASIC18.8■□□□□ 0.6
APPP05067 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.8■□□□□ 0.6
APPP05067 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC18.8■□□□□ 0.6
APPP05067 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
APPP05067 FUK-207ENST00000571514 3054 ntTSL 2 BASIC18.8■□□□□ 0.6
APPP05067 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
APPP05067 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.79■□□□□ 0.6
APPP05067 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.79■□□□□ 0.6
APPP05067 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
APPP05067 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
APPP05067 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms