Protein–RNA interactions for Protein: P05023

ATP1A1, Sodium/potassium-transporting ATPase subunit alpha-1, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1P05023 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.72■□□□□ 0.27
ATP1A1P05023 AL136982.4-201ENST00000437689 1740 ntBASIC16.72■□□□□ 0.27
ATP1A1P05023 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.72■□□□□ 0.27
ATP1A1P05023 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ATP1A1P05023 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
ATP1A1P05023 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP1A1P05023 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ATP1A1P05023 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ATP1A1P05023 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 AC041040.2-201ENST00000622926 2899 ntBASIC16.71■□□□□ 0.27
ATP1A1P05023 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 UPF3AP3-201ENST00000420996 769 ntBASIC16.71■□□□□ 0.27
ATP1A1P05023 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP1A1P05023 MCCD1P2-201ENST00000423228 335 ntBASIC16.71■□□□□ 0.27
ATP1A1P05023 AC074386.1-202ENST00000463561 864 ntBASIC16.71■□□□□ 0.27
ATP1A1P05023 AC112482.1-201ENST00000492080 688 ntBASIC16.71■□□□□ 0.27
ATP1A1P05023 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP1A1P05023 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP1A1P05023 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP1A1P05023 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.71■□□□□ 0.27
ATP1A1P05023 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
ATP1A1P05023 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ATP1A1P05023 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.71■□□□□ 0.27
ATP1A1P05023 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ATP1A1P05023 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
ATP1A1P05023 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
ATP1A1P05023 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
ATP1A1P05023 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.71■□□□□ 0.26
ATP1A1P05023 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
ATP1A1P05023 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP1A1P05023 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ATP1A1P05023 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 ABR-228ENST00000574437 3196 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP1A1P05023 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC16.7■□□□□ 0.26
ATP1A1P05023 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
ATP1A1P05023 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP1A1P05023 AC004987.2-201ENST00000395959 1148 ntBASIC16.7■□□□□ 0.26
ATP1A1P05023 RPSAP43-201ENST00000402237 625 ntBASIC16.7■□□□□ 0.26
ATP1A1P05023 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.7■□□□□ 0.26
ATP1A1P05023 DNAJB3-201ENST00000446806 729 ntBASIC16.7■□□□□ 0.26
ATP1A1P05023 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.7■□□□□ 0.26
ATP1A1P05023 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.7■□□□□ 0.26
ATP1A1P05023 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP1A1P05023 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.7■□□□□ 0.26
ATP1A1P05023 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP1A1P05023 AL450472.2-201ENST00000603663 1156 ntBASIC16.7■□□□□ 0.26
ATP1A1P05023 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.7■□□□□ 0.26
ATP1A1P05023 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC16.7■□□□□ 0.26
ATP1A1P05023 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.7■□□□□ 0.26
ATP1A1P05023 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ATP1A1P05023 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP1A1P05023 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP1A1P05023 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP1A1P05023 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ATP1A1P05023 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP1A1P05023 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ATP1A1P05023 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
ATP1A1P05023 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP1A1P05023 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.69■□□□□ 0.26
ATP1A1P05023 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
ATP1A1P05023 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.69■□□□□ 0.26
ATP1A1P05023 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.69■□□□□ 0.26
ATP1A1P05023 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ATP1A1P05023 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms