Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 AC023141.13-201ENST00000604991 943 ntBASIC11.97□□□□□ -0.49
TCRAP04437 AL161645.1-201ENST00000622716 1255 ntBASIC11.97□□□□□ -0.49
TCRAP04437 AC010507.1-201ENST00000633895 436 ntBASIC11.97□□□□□ -0.49
TCRAP04437 AC007064.4-201ENST00000637740 555 ntBASIC11.97□□□□□ -0.49
TCRAP04437 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
TCRAP04437 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
TCRAP04437 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
TCRAP04437 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.97□□□□□ -0.49
TCRAP04437 CICP4-201ENST00000447359 2812 ntBASIC11.96□□□□□ -0.49
TCRAP04437 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.96□□□□□ -0.49
TCRAP04437 CICP14-201ENST00000629111 2732 ntBASIC11.96□□□□□ -0.49
TCRAP04437 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 CNTNAP3P2-201ENST00000617175 3861 ntBASIC11.96□□□□□ -0.49
TCRAP04437 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
TCRAP04437 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRAP04437 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRAP04437 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRAP04437 RHOQP3-201ENST00000437982 621 ntBASIC11.96□□□□□ -0.49
TCRAP04437 FAM197Y8-203ENST00000450145 560 ntBASIC11.96□□□□□ -0.49
TCRAP04437 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 RNF146-204ENST00000476956 884 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRAP04437 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC11.96□□□□□ -0.49
TCRAP04437 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRAP04437 IFNL4P1-201ENST00000607083 540 ntBASIC11.96□□□□□ -0.49
TCRAP04437 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRAP04437 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRAP04437 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TCRAP04437 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRAP04437 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRAP04437 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRAP04437 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRAP04437 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms