Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 CLEC4GP1-201ENST00000596555 870 ntBASIC13.2□□□□□ -0.3
CD74P04233 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
CD74P04233 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 AC092135.3-201ENST00000624151 1846 ntBASIC13.2□□□□□ -0.3
CD74P04233 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.2□□□□□ -0.3
CD74P04233 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CD74P04233 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.2□□□□□ -0.3
CD74P04233 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.19□□□□□ -0.3
CD74P04233 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 LINC01230-201ENST00000625222 3017 ntBASIC13.19□□□□□ -0.3
CD74P04233 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 MYO15B-237ENST00000642007 4893 ntBASIC13.19□□□□□ -0.3
CD74P04233 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 AP002414.3-201ENST00000589352 1468 ntBASIC13.19□□□□□ -0.3
CD74P04233 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
CD74P04233 INIP-202ENST00000374236 874 ntTSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 FALEC-201ENST00000416894 566 ntTSL 3 BASIC13.19□□□□□ -0.3
CD74P04233 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.19□□□□□ -0.3
CD74P04233 AF238378.1-201ENST00000526806 358 ntBASIC13.19□□□□□ -0.3
CD74P04233 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC13.19□□□□□ -0.3
CD74P04233 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 KRT8P37-201ENST00000451609 1420 ntBASIC13.19□□□□□ -0.3
CD74P04233 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.19□□□□□ -0.3
CD74P04233 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CD74P04233 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CD74P04233 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
CD74P04233 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CD74P04233 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
CD74P04233 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.18□□□□□ -0.3
CD74P04233 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
CD74P04233 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms