Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC18.41■□□□□ 0.54
MYCNP04198 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.41■□□□□ 0.54
MYCNP04198 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC18.41■□□□□ 0.54
MYCNP04198 PSMD10P2-202ENST00000626135 819 ntTSL 5 BASIC18.41■□□□□ 0.54
MYCNP04198 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MYCNP04198 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
MYCNP04198 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MYCNP04198 PAXIP1-AS2-201ENST00000397551 1692 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
MYCNP04198 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
MYCNP04198 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.41■□□□□ 0.54
MYCNP04198 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
MYCNP04198 OR51C1P-202ENST00000641159 1444 ntBASIC18.4■□□□□ 0.54
MYCNP04198 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 TPRKB-201ENST00000272424 748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 ETDB-201ENST00000423661 681 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 ETDB-202ENST00000426364 388 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MYCNP04198 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
MYCNP04198 AC034244.2-201ENST00000514668 858 ntBASIC18.4■□□□□ 0.54
MYCNP04198 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC18.4■□□□□ 0.54
MYCNP04198 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 AC005730.2-201ENST00000564549 1184 ntBASIC18.4■□□□□ 0.54
MYCNP04198 AC026336.4-201ENST00000624565 1050 ntBASIC18.4■□□□□ 0.54
MYCNP04198 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 AL023806.1-201ENST00000603994 1649 ntBASIC18.4■□□□□ 0.54
MYCNP04198 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.4■□□□□ 0.54
MYCNP04198 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
MYCNP04198 SERPINA9-201ENST00000298845 1423 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
MYCNP04198 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
MYCNP04198 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 AC079776.1-201ENST00000401540 1152 ntBASIC18.39■□□□□ 0.53
MYCNP04198 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC18.39■□□□□ 0.53
MYCNP04198 MYCLP2-201ENST00000449268 967 ntBASIC18.39■□□□□ 0.53
MYCNP04198 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC18.39■□□□□ 0.53
MYCNP04198 GTF2IP9-201ENST00000502460 301 ntBASIC18.39■□□□□ 0.53
MYCNP04198 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 TPRX2P-201ENST00000535362 881 ntBASIC18.39■□□□□ 0.53
MYCNP04198 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC18.39■□□□□ 0.53
MYCNP04198 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 MYL12A-207ENST00000579226 947 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
MYCNP04198 AC018638.6-201ENST00000605007 1267 ntBASIC18.39■□□□□ 0.53
MYCNP04198 ZBTB20-AS5-203ENST00000628886 819 ntTSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
MYCNP04198 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
MYCNP04198 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
MYCNP04198 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.38■□□□□ 0.53
MYCNP04198 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
MYCNP04198 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms