Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
MT-ND3P03897 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
MT-ND3P03897 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
MT-ND3P03897 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.04■□□□□ 0.16
MT-ND3P03897 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 AL355306.1-201ENST00000415580 579 ntBASIC16.04■□□□□ 0.16
MT-ND3P03897 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 AC011467.4-201ENST00000594891 528 ntBASIC16.04■□□□□ 0.16
MT-ND3P03897 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 AC106028.4-201ENST00000614509 607 ntBASIC16.04■□□□□ 0.16
MT-ND3P03897 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.04■□□□□ 0.16
MT-ND3P03897 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.04■□□□□ 0.16
MT-ND3P03897 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.04■□□□□ 0.16
MT-ND3P03897 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
MT-ND3P03897 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.04■□□□□ 0.16
MT-ND3P03897 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 AC009090.5-201ENST00000624886 2285 ntBASIC16.03■□□□□ 0.16
MT-ND3P03897 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 GOLGA8DP-202ENST00000341390 2184 ntBASIC16.03■□□□□ 0.16
MT-ND3P03897 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MT-ND3P03897 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
MT-ND3P03897 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 MIR770-201ENST00000390219 98 ntBASIC16.03■□□□□ 0.16
MT-ND3P03897 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.03■□□□□ 0.16
MT-ND3P03897 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MT-ND3P03897 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 AC093028.1-201ENST00000622998 982 ntBASIC16.03■□□□□ 0.16
MT-ND3P03897 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.03■□□□□ 0.16
MT-ND3P03897 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
MT-ND3P03897 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
MT-ND3P03897 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.03■□□□□ 0.16
MT-ND3P03897 CICP23-201ENST00000605013 2741 ntBASIC16.03■□□□□ 0.16
MT-ND3P03897 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
MT-ND3P03897 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms