Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 PMPCAP1-201ENST00000508114 1576 ntBASIC11.85□□□□□ -0.51
HLA-DQA1P01909 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AP001282.1-201ENST00000531301 1499 ntBASIC11.85□□□□□ -0.51
HLA-DQA1P01909 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 LINC00265-3P-201ENST00000447588 903 ntBASIC11.85□□□□□ -0.51
HLA-DQA1P01909 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AL160237.2-201ENST00000556165 472 ntBASIC11.85□□□□□ -0.51
HLA-DQA1P01909 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 AC116407.4-201ENST00000623319 1061 ntBASIC11.85□□□□□ -0.51
HLA-DQA1P01909 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC11.85□□□□□ -0.51
HLA-DQA1P01909 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 AL645939.2-201ENST00000427340 991 ntBASIC11.84□□□□□ -0.51
HLA-DQA1P01909 MINOS1P3-201ENST00000457048 203 ntBASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 AC087641.1-201ENST00000557561 1021 ntBASIC11.84□□□□□ -0.51
HLA-DQA1P01909 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 AP002414.4-201ENST00000589764 1148 ntBASIC11.84□□□□□ -0.51
HLA-DQA1P01909 Z69720.1-201ENST00000601483 472 ntBASIC11.84□□□□□ -0.51
HLA-DQA1P01909 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC11.84□□□□□ -0.51
HLA-DQA1P01909 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms