Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 AC020658.6-201ENST00000623564 1870 ntBASIC15.78■□□□□ 0.12
GPC4O75487 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
GPC4O75487 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.77■□□□□ 0.12
GPC4O75487 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 AL035456.1-201ENST00000456064 1369 ntBASIC15.77■□□□□ 0.12
GPC4O75487 AC067750.1-201ENST00000608826 6545 ntBASIC15.77■□□□□ 0.12
GPC4O75487 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.77■□□□□ 0.12
GPC4O75487 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.77■□□□□ 0.12
GPC4O75487 AC025678.2-201ENST00000562061 970 ntBASIC15.77■□□□□ 0.12
GPC4O75487 RN7SL828P-201ENST00000607615 303 ntBASIC15.77■□□□□ 0.12
GPC4O75487 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.77■□□□□ 0.12
GPC4O75487 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
GPC4O75487 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.77■□□□□ 0.12
GPC4O75487 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
GPC4O75487 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC15.77■□□□□ 0.11
GPC4O75487 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.77■□□□□ 0.11
GPC4O75487 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 TMBIM7P-203ENST00000641617 1718 ntBASIC15.77■□□□□ 0.11
GPC4O75487 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
GPC4O75487 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 TNRC18P2-201ENST00000417666 2714 ntBASIC15.76■□□□□ 0.11
GPC4O75487 LINC02228-204ENST00000642115 2962 ntBASIC15.76■□□□□ 0.11
GPC4O75487 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 KRT18P28-201ENST00000453838 1332 ntBASIC15.76■□□□□ 0.11
GPC4O75487 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
GPC4O75487 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.76■□□□□ 0.11
GPC4O75487 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.76■□□□□ 0.11
GPC4O75487 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
GPC4O75487 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC15.76■□□□□ 0.11
GPC4O75487 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.76■□□□□ 0.11
GPC4O75487 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.76■□□□□ 0.11
GPC4O75487 AC004449.1-201ENST00000564240 433 ntBASIC15.76■□□□□ 0.11
GPC4O75487 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.76■□□□□ 0.11
GPC4O75487 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.76■□□□□ 0.11
GPC4O75487 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.76■□□□□ 0.11
GPC4O75487 Z92544.3-201ENST00000624747 417 ntBASIC15.76■□□□□ 0.11
GPC4O75487 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.76■□□□□ 0.11
GPC4O75487 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms