Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.82■□□□□ 0.12
PRAMEF11O60813 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
PRAMEF11O60813 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 CTBP2P3-201ENST00000585629 1255 ntBASIC15.81■□□□□ 0.12
PRAMEF11O60813 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 AL645728.2-202ENST00000641679 227 ntBASIC15.81■□□□□ 0.12
PRAMEF11O60813 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.81■□□□□ 0.12
PRAMEF11O60813 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
PRAMEF11O60813 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.8■□□□□ 0.12
PRAMEF11O60813 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 KRT8P44-201ENST00000441609 1350 ntBASIC15.8■□□□□ 0.12
PRAMEF11O60813 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 DGCR5-201ENST00000399539 862 ntBASIC15.8■□□□□ 0.12
PRAMEF11O60813 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 INTS4P2-202ENST00000614726 2019 ntBASIC15.8■□□□□ 0.12
PRAMEF11O60813 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
PRAMEF11O60813 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
PRAMEF11O60813 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
PRAMEF11O60813 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms