Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.72□□□□□ -0.05
HCN1O60741 MTND6P24-201ENST00000440466 518 ntBASIC14.72□□□□□ -0.05
HCN1O60741 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.72□□□□□ -0.05
HCN1O60741 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
HCN1O60741 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 AC004890.2-204ENST00000481968 304 ntBASIC14.72□□□□□ -0.05
HCN1O60741 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 TERF1P3-201ENST00000505638 1227 ntBASIC14.72□□□□□ -0.05
HCN1O60741 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.72□□□□□ -0.05
HCN1O60741 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.72□□□□□ -0.05
HCN1O60741 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
HCN1O60741 AL589739.1-201ENST00000607720 493 ntBASIC14.72□□□□□ -0.05
HCN1O60741 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.72□□□□□ -0.05
HCN1O60741 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.72□□□□□ -0.05
HCN1O60741 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 AC023157.3-201ENST00000619086 2088 ntBASIC14.72□□□□□ -0.05
HCN1O60741 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
HCN1O60741 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.71□□□□□ -0.05
HCN1O60741 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.71□□□□□ -0.05
HCN1O60741 AL035633.1-201ENST00000406139 838 ntBASIC14.71□□□□□ -0.05
HCN1O60741 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 AC002472.2-201ENST00000442739 958 ntBASIC14.71□□□□□ -0.05
HCN1O60741 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.71□□□□□ -0.05
HCN1O60741 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.71□□□□□ -0.05
HCN1O60741 LHX6-205ENST00000464484 666 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
HCN1O60741 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.71□□□□□ -0.05
HCN1O60741 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.71□□□□□ -0.05
HCN1O60741 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.71□□□□□ -0.05
HCN1O60741 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.71□□□□□ -0.05
HCN1O60741 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
HCN1O60741 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.71□□□□□ -0.05
HCN1O60741 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
HCN1O60741 AP002414.2-201ENST00000591780 3365 ntBASIC14.71□□□□□ -0.06
HCN1O60741 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
HCN1O60741 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.71□□□□□ -0.06
HCN1O60741 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
HCN1O60741 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
HCN1O60741 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC14.7□□□□□ -0.06
HCN1O60741 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.7□□□□□ -0.06
HCN1O60741 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.7□□□□□ -0.06
HCN1O60741 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.7□□□□□ -0.06
HCN1O60741 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.7□□□□□ -0.06
HCN1O60741 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC14.7□□□□□ -0.06
HCN1O60741 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
HCN1O60741 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms