Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.19■□□□□ 0.5
CTNND1O60716 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CTNND1O60716 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 PCDHA14-201ENST00000506751 2298 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 AGER-203ENST00000375065 665 ntTSL 2 BASIC18.18■□□□□ 0.5
CTNND1O60716 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CTNND1O60716 BTBD6P1-201ENST00000412176 1267 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 KLF2P2-201ENST00000416807 1039 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 NUS1P3-201ENST00000423502 862 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC18.18■□□□□ 0.5
CTNND1O60716 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC18.18■□□□□ 0.5
CTNND1O60716 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 TPI1-206ENST00000488464 791 ntTSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC18.18■□□□□ 0.5
CTNND1O60716 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 PRKN-211ENST00000615065 261 ntTSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.18■□□□□ 0.5
CTNND1O60716 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CTNND1O60716 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC18.18■□□□□ 0.5
CTNND1O60716 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CTNND1O60716 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 MTHFR-217ENST00000641820 1569 ntBASIC18.17■□□□□ 0.5
CTNND1O60716 MFF-204ENST00000353339 2186 ntTSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC18.17■□□□□ 0.5
CTNND1O60716 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CTNND1O60716 MIR1202-201ENST00000408529 83 ntBASIC18.17■□□□□ 0.5
CTNND1O60716 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.17■□□□□ 0.5
CTNND1O60716 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.17■□□□□ 0.5
CTNND1O60716 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC18.17■□□□□ 0.5
CTNND1O60716 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC18.17■□□□□ 0.5
CTNND1O60716 AC025181.2-201ENST00000606994 802 ntBASIC18.17■□□□□ 0.5
CTNND1O60716 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.17■□□□□ 0.5
CTNND1O60716 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CTNND1O60716 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC18.17■□□□□ 0.5
CTNND1O60716 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC18.16■□□□□ 0.5
CTNND1O60716 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 RNU1-114P-201ENST00000365297 166 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC18.16■□□□□ 0.5
CTNND1O60716 AL591846.1-201ENST00000451736 433 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 AC104306.2-201ENST00000451877 341 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 AL590640.2-201ENST00000457038 527 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 AP001258.2-201ENST00000529891 490 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 MIR4741-201ENST00000579822 90 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC18.16■□□□□ 0.5
CTNND1O60716 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 AC068587.10-201ENST00000641210 219 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 PRSS30P-206ENST00000641773 873 ntBASIC18.16■□□□□ 0.5
CTNND1O60716 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC18.16■□□□□ 0.5
CTNND1O60716 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.16■□□□□ 0.5
CTNND1O60716 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CTNND1O60716 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.16■□□□□ 0.5
CTNND1O60716 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms