Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
PEX1O43933 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.38■□□□□ 0.05
PEX1O43933 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 AGAP7P-201ENST00000582299 2062 ntBASIC15.37■□□□□ 0.05
PEX1O43933 AGAP14-201ENST00000624701 2060 ntBASIC15.37■□□□□ 0.05
PEX1O43933 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.37■□□□□ 0.05
PEX1O43933 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 MIR4492-201ENST00000581627 80 ntBASIC15.37■□□□□ 0.05
PEX1O43933 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.37■□□□□ 0.05
PEX1O43933 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
PEX1O43933 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 AC105250.1-201ENST00000509378 2057 ntBASIC15.37■□□□□ 0.05
PEX1O43933 AC091951.1-201ENST00000512854 2465 ntBASIC15.37■□□□□ 0.05
PEX1O43933 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.37■□□□□ 0.05
PEX1O43933 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
PEX1O43933 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.36■□□□□ 0.05
PEX1O43933 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.36■□□□□ 0.05
PEX1O43933 ADH5P3-201ENST00000433842 1137 ntBASIC15.36■□□□□ 0.05
PEX1O43933 SPDYE11-202ENST00000450699 704 ntBASIC15.36■□□□□ 0.05
PEX1O43933 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 SPDYE9P-201ENST00000570642 692 ntBASIC15.36■□□□□ 0.05
PEX1O43933 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 SPDYE10P-202ENST00000612005 668 ntBASIC15.36■□□□□ 0.05
PEX1O43933 SPDYE8P-202ENST00000612377 668 ntBASIC15.36■□□□□ 0.05
PEX1O43933 AL161645.1-201ENST00000622716 1255 ntBASIC15.36■□□□□ 0.05
PEX1O43933 AP001350.2-201ENST00000625104 1094 ntBASIC15.36■□□□□ 0.05
PEX1O43933 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.36■□□□□ 0.05
PEX1O43933 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PEX1O43933 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PEX1O43933 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PEX1O43933 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
PEX1O43933 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms