Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC11.29□□□□□ -0.6
PAX4O43316 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC11.29□□□□□ -0.6
PAX4O43316 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
PAX4O43316 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC11.29□□□□□ -0.6
PAX4O43316 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 AC008677.1-201ENST00000519230 1561 ntBASIC11.28□□□□□ -0.6
PAX4O43316 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 AC134407.2-201ENST00000625089 1978 ntBASIC11.28□□□□□ -0.6
PAX4O43316 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
PAX4O43316 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 ELP6-209ENST00000446787 894 ntTSL 3 BASIC11.28□□□□□ -0.6
PAX4O43316 HLA-J-203ENST00000494367 1087 ntBASIC11.28□□□□□ -0.6
PAX4O43316 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 AC069262.1-201ENST00000539058 672 ntBASIC11.28□□□□□ -0.6
PAX4O43316 AL512356.2-201ENST00000546955 174 ntBASIC11.28□□□□□ -0.6
PAX4O43316 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.28□□□□□ -0.6
PAX4O43316 LITAF-210ENST00000571976 548 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 LITAF-214ENST00000574703 486 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 AL158211.2-201ENST00000607282 395 ntBASIC11.28□□□□□ -0.6
PAX4O43316 AC006538.3-201ENST00000612495 578 ntBASIC11.28□□□□□ -0.6
PAX4O43316 AC007967.4-201ENST00000614700 386 ntBASIC11.28□□□□□ -0.6
PAX4O43316 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.28□□□□□ -0.6
PAX4O43316 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC11.28□□□□□ -0.6
PAX4O43316 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
PAX4O43316 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
PAX4O43316 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
PAX4O43316 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.27□□□□□ -0.6
PAX4O43316 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
PAX4O43316 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 GRAMD4P3-201ENST00000621665 1669 ntBASIC11.27□□□□□ -0.6
PAX4O43316 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 AC011477.6-201ENST00000604980 1927 ntBASIC11.27□□□□□ -0.6
PAX4O43316 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
PAX4O43316 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
PAX4O43316 TET3-201ENST00000305799 5174 ntTSL 5 BASIC11.27□□□□□ -0.61
PAX4O43316 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PAX4O43316 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.27□□□□□ -0.61
PAX4O43316 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
PAX4O43316 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
PAX4O43316 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
PAX4O43316 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
PAX4O43316 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC11.27□□□□□ -0.61
PAX4O43316 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC11.27□□□□□ -0.61
PAX4O43316 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.27□□□□□ -0.61
PAX4O43316 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms