Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
NDUFA1O15239 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.77□□□□□ -0.68
NDUFA1O15239 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
NDUFA1O15239 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
NDUFA1O15239 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
NDUFA1O15239 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 CENPM-204ENST00000402420 688 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 FAM8A3P-201ENST00000427218 844 ntBASIC10.77□□□□□ -0.69
NDUFA1O15239 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 EMBP1-201ENST00000458200 901 ntBASIC10.77□□□□□ -0.69
NDUFA1O15239 AP002469.2-201ENST00000531724 424 ntBASIC10.77□□□□□ -0.69
NDUFA1O15239 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.77□□□□□ -0.69
NDUFA1O15239 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PRKN-208ENST00000610470 531 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PRKN-209ENST00000612485 225 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 ST20-AS1-201ENST00000560255 4223 ntBASIC10.77□□□□□ -0.69
NDUFA1O15239 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC10.77□□□□□ -0.69
NDUFA1O15239 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
NDUFA1O15239 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
NDUFA1O15239 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 ARHGAP23P1-201ENST00000562773 1937 ntBASIC10.76□□□□□ -0.69
NDUFA1O15239 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC10.76□□□□□ -0.69
NDUFA1O15239 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 AC023024.2-201ENST00000623561 1993 ntBASIC10.76□□□□□ -0.69
NDUFA1O15239 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC10.76□□□□□ -0.69
NDUFA1O15239 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.76□□□□□ -0.69
NDUFA1O15239 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
NDUFA1O15239 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 AC009090.5-201ENST00000624886 2285 ntBASIC10.76□□□□□ -0.69
NDUFA1O15239 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
NDUFA1O15239 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
NDUFA1O15239 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC10.76□□□□□ -0.69
NDUFA1O15239 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
NDUFA1O15239 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC10.76□□□□□ -0.69
NDUFA1O15239 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms