Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC24.46■■□□□ 1.51
CHD1O14646 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC24.46■■□□□ 1.51
CHD1O14646 ALOX12P2-203ENST00000570921 1945 ntBASIC24.46■■□□□ 1.51
CHD1O14646 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC24.46■■□□□ 1.51
CHD1O14646 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1O14646 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC24.46■■□□□ 1.51
CHD1O14646 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC24.46■■□□□ 1.51
CHD1O14646 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC24.46■■□□□ 1.51
CHD1O14646 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CHD1O14646 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1O14646 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1O14646 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CHD1O14646 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
CHD1O14646 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC24.45■■□□□ 1.5
CHD1O14646 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC24.45■■□□□ 1.5
CHD1O14646 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CHD1O14646 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 RAN-210ENST00000541630 1475 ntTSL 2 BASIC24.45■■□□□ 1.5
CHD1O14646 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC24.45■■□□□ 1.5
CHD1O14646 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 POLR2E-204ENST00000586746 1096 ntAPPRIS P1 TSL 3 BASIC24.45■■□□□ 1.5
CHD1O14646 AL139339.2-201ENST00000608063 657 ntBASIC24.45■■□□□ 1.5
CHD1O14646 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC24.45■■□□□ 1.5
CHD1O14646 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CHD1O14646 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 AC026434.2-201ENST00000506094 1078 ntBASIC24.44■■□□□ 1.5
CHD1O14646 AC106047.2-201ENST00000511723 743 ntBASIC24.44■■□□□ 1.5
CHD1O14646 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC24.44■■□□□ 1.5
CHD1O14646 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC24.44■■□□□ 1.5
CHD1O14646 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC24.44■■□□□ 1.5
CHD1O14646 AC007326.1-201ENST00000604539 458 ntBASIC24.44■■□□□ 1.5
CHD1O14646 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC24.44■■□□□ 1.5
CHD1O14646 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 AC020910.5-201ENST00000623668 1865 ntBASIC24.44■■□□□ 1.5
CHD1O14646 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC24.44■■□□□ 1.5
CHD1O14646 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC24.44■■□□□ 1.5
CHD1O14646 AL138725.1-201ENST00000407347 1314 ntBASIC24.44■■□□□ 1.5
CHD1O14646 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC24.44■■□□□ 1.5
CHD1O14646 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC24.44■■□□□ 1.5
CHD1O14646 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC24.44■■□□□ 1.5
CHD1O14646 DPY19L2P5-201ENST00000456300 331 ntBASIC24.44■■□□□ 1.5
CHD1O14646 RN7SL470P-201ENST00000583069 259 ntBASIC24.44■■□□□ 1.5
CHD1O14646 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC24.44■■□□□ 1.5
CHD1O14646 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
CHD1O14646 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
CHD1O14646 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
CHD1O14646 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC24.43■■□□□ 1.5
CHD1O14646 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD1O14646 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1O14646 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC24.43■■□□□ 1.5
CHD1O14646 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC24.43■■□□□ 1.5
CHD1O14646 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC24.43■■□□□ 1.5
CHD1O14646 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC24.43■■□□□ 1.5
CHD1O14646 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC24.43■■□□□ 1.5
CHD1O14646 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC24.43■■□□□ 1.5
CHD1O14646 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC24.43■■□□□ 1.5
CHD1O14646 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC24.43■■□□□ 1.5
CHD1O14646 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
CHD1O14646 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CHD1O14646 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
CHD1O14646 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC24.42■■□□□ 1.5
CHD1O14646 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms