Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CCDC162PA2VCL2 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL645939.2-201ENST00000427340 991 ntBASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL844908.2-201ENST00000609461 460 ntBASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 FLJ16779-201ENST00000612722 7638 ntBASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 AL109954.1-202ENST00000564051 2148 ntBASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCDC162PA2VCL2 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AC100757.3-201ENST00000622361 1406 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 LINC01115-203ENST00000606068 577 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AL590560.3-201ENST00000623350 461 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 HADH-212ENST00000638621 741 ntTSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AF228730.6-201ENST00000641497 218 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AC084121.3-201ENST00000641716 218 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 AL109936.8-201ENST00000641772 604 ntBASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCDC162PA2VCL2 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms