Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC006486.2-201ENST00000624246 2199 ntBASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TSSK5P-201ENST00000423978 907 ntBASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 AP001282.1-201ENST00000531301 1499 ntBASIC12.65□□□□□ -0.38
TCRBV4S1A1TA0A5B7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CICP13-201ENST00000422015 2789 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AL109954.1-202ENST00000564051 2148 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PCDHA3-202ENST00000532566 4594 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 PIN1P1-201ENST00000412108 996 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 SERBP1P3-201ENST00000459980 809 ntBASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
TCRBV4S1A1TA0A5B7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.64□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms