Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
DDX49Q9Y6V7 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AC087481.3-201ENST00000602886 1894 ntBASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 TSPY16P-201ENST00000449843 468 ntBASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 AC026748.1-201ENST00000624349 3251 ntBASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DDX49Q9Y6V7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 BASP1P1-201ENST00000430708 665 ntBASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 CCDC74BP1-201ENST00000508880 1123 ntBASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DDX49Q9Y6V7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DDX49Q9Y6V7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms