Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AC068587.3-201ENST00000526613 355 ntBASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AC124283.3-201ENST00000570869 594 ntBASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 METTL26-214ENST00000614890 801 ntTSL 3 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.1■□□□□ 0.49
CTDP1Q9Y5B0 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
CTDP1Q9Y5B0 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
CTDP1Q9Y5B0 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 AL133267.1-201ENST00000398220 340 ntBASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 HLA-V-201ENST00000429037 534 ntBASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 GPX4-206ENST00000588919 803 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 AC000095.1-201ENST00000603208 874 ntBASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTDP1Q9Y5B0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTDP1Q9Y5B0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms