Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 AC084364.1-201ENST00000551967 1556 ntBASIC16.24■□□□□ 0.19
YIPF1Q9Y548 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
YIPF1Q9Y548 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 ACTBP8-201ENST00000403258 1108 ntBASIC16.23■□□□□ 0.19
YIPF1Q9Y548 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AC127383.1-201ENST00000444697 1800 ntBASIC16.23■□□□□ 0.19
YIPF1Q9Y548 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.23■□□□□ 0.19
YIPF1Q9Y548 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 LINC02199-201ENST00000506655 2702 ntBASIC16.22■□□□□ 0.19
YIPF1Q9Y548 FOS-202ENST00000535987 1402 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AL590640.2-201ENST00000457038 527 ntBASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 RIT1-205ENST00000539040 919 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms