Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 AC129492.6-201ENST00000611383 1305 ntBASIC12.37□□□□□ -0.43
RPH3ALQ9UNE2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 PAN3-AS1-201ENST00000563843 1351 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 RPS15P9-201ENST00000494093 319 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 NME3-204ENST00000563498 920 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AC006557.2-201ENST00000592985 1240 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 NPAP1P7-201ENST00000613027 823 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AC091951.1-201ENST00000512854 2465 ntBASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPH3ALQ9UNE2 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 CYP51A1P2-201ENST00000419457 1499 ntBASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 EMD-201ENST00000369835 966 ntTSL 3 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 AP000550.4-202ENST00000639755 178 ntBASIC12.35□□□□□ -0.43
RPH3ALQ9UNE2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms