Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 Z97205.2-201ENST00000564697 1639 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PAUPAR-201ENST00000630360 2965 ntBASIC15.67■□□□□ 0.1
SPASTQ9UBP0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SPASTQ9UBP0 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ATP5G2P4-201ENST00000442175 420 ntBASIC15.66■□□□□ 0.1
SPASTQ9UBP0 EEF1DP4-201ENST00000446006 880 ntBASIC15.66■□□□□ 0.1
SPASTQ9UBP0 RHOA-206ENST00000454011 889 ntTSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ELK1P1-201ENST00000485699 580 ntBASIC15.66■□□□□ 0.1
SPASTQ9UBP0 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AC132938.2-201ENST00000579188 680 ntBASIC15.66■□□□□ 0.1
SPASTQ9UBP0 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AL591163.1-201ENST00000641757 987 ntBASIC15.66■□□□□ 0.1
SPASTQ9UBP0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.66■□□□□ 0.1
SPASTQ9UBP0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPASTQ9UBP0 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms