Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 WARS-232ENST00000556645 2508 ntTSL 5 BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HDAC6Q9UBN7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 RPL13P2-201ENST00000440687 659 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 CROCCP4-201ENST00000457096 498 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 AC010319.3-201ENST00000597028 470 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 RPSAP52-203ENST00000622976 1023 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 AL158212.4-201ENST00000624062 1286 ntBASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
HDAC6Q9UBN7 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC074338.1-201ENST00000416825 156 ntBASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC234783.1-201ENST00000441761 496 ntBASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC245100.5-201ENST00000452108 331 ntBASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 SNX29P1-201ENST00000548357 1007 ntBASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 MIR6775-201ENST00000617557 69 ntBASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.71■□□□□ 0.43
HDAC6Q9UBN7 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HDAC6Q9UBN7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
HDAC6Q9UBN7 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
HDAC6Q9UBN7 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 BNIP3P1-202ENST00000550043 1585 ntBASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.7■□□□□ 0.42
HDAC6Q9UBN7 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms