Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 AC112492.5-201ENST00000421897 457 ntBASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ACTG1P3-201ENST00000431775 1114 ntBASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 AC026410.3-201ENST00000514280 936 ntBASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 MIR600HG-201ENST00000449175 5984 ntBASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CLCF1Q9UBD9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 DRD5P1-201ENST00000456605 1438 ntBASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 RAB43P1-201ENST00000561790 589 ntBASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AL359881.2-201ENST00000602973 570 ntBASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CLCF1Q9UBD9 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.19
CLCF1Q9UBD9 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CLCF1Q9UBD9 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CLCF1Q9UBD9 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC13.89□□□□□ -0.19
CLCF1Q9UBD9 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms