Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
DNMT3BQ9UBC3 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 KRT18P25-201ENST00000508931 1278 ntBASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ZNF767P-206ENST00000513792 565 ntBASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 MIR3615-201ENST00000581999 87 ntBASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
DNMT3BQ9UBC3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AL138709.1-201ENST00000614840 1693 ntBASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 MIR326-201ENST00000362220 95 ntBASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 MIR1247-201ENST00000408206 136 ntBASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AC243960.2-201ENST00000600996 747 ntBASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 AL603832.2-201ENST00000566195 2125 ntBASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
DNMT3BQ9UBC3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 KRT8P35-201ENST00000483942 1338 ntBASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 GUK1-206ENST00000366723 845 ntTSL 5 BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 GPAA1P2-201ENST00000417923 928 ntBASIC16.23■□□□□ 0.19
DNMT3BQ9UBC3 FAM86HP-204ENST00000513466 959 ntBASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms