Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 CTBP2P5-201ENST00000454986 1264 ntBASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
TM9SF3Q9HD45 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 AL596087.1-201ENST00000400979 1969 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 TOMM22P5-201ENST00000416399 439 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 KRT18P64-201ENST00000434946 1219 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 KLF2P4-201ENST00000451959 1225 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 APRT-204ENST00000563655 709 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 AL022328.1-201ENST00000610050 478 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 HYMAI-201ENST00000635591 3347 ntBASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TM9SF3Q9HD45 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 FAM86MP-201ENST00000340703 885 ntBASIC15.67■□□□□ 0.1
TM9SF3Q9HD45 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms