Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 ZNF890P-202ENST00000530367 1156 ntBASIC16.57■□□□□ 0.24
CD248Q9HCU0 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 CR383656.12-201ENST00000549567 513 ntBASIC16.57■□□□□ 0.24
CD248Q9HCU0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.57■□□□□ 0.24
CD248Q9HCU0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD248Q9HCU0 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD248Q9HCU0 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD248Q9HCU0 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD248Q9HCU0 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 CETN4P-206ENST00000642099 2168 ntBASIC16.56■□□□□ 0.24
CD248Q9HCU0 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NME2P1-201ENST00000426182 414 ntBASIC16.56■□□□□ 0.24
CD248Q9HCU0 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AC004840.1-201ENST00000636359 365 ntBASIC16.56■□□□□ 0.24
CD248Q9HCU0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CD248Q9HCU0 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.56■□□□□ 0.24
CD248Q9HCU0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AC007191.1-201ENST00000623179 2995 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 COX5BP8-201ENST00000416911 349 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 AC093724.1-201ENST00000448659 1027 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AL079307.3-201ENST00000556114 283 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AL589739.1-201ENST00000607720 493 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 AL645728.1-201ENST00000366221 2101 ntBASIC16.55■□□□□ 0.24
CD248Q9HCU0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.55■□□□□ 0.24
CD248Q9HCU0 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
CD248Q9HCU0 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms