Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC079776.4-201ENST00000511039 504 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC061975.2-201ENST00000581722 295 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC073389.1-201ENST00000595595 795 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AC068137.2-201ENST00000605408 478 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 C8orf49-201ENST00000525043 1968 ntBASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
COMMD4Q9H0A8 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 CICP23-201ENST00000605013 2741 ntBASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TPM4P1-201ENST00000436100 807 ntBASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 KRT19P2-202ENST00000557173 1012 ntBASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AL450472.2-201ENST00000603663 1156 ntBASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
COMMD4Q9H0A8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms