Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 CYP51A1P2-201ENST00000419457 1499 ntBASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 NSUN5P1-202ENST00000421140 1535 ntBASIC13.8□□□□□ -0.2
SLIRPQ9GZT3 BNIP3P1-202ENST00000550043 1585 ntBASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 MIR3909-201ENST00000579518 119 ntBASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AL805961.1-202ENST00000641562 540 ntBASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
SLIRPQ9GZT3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 RNF152P1-201ENST00000397754 604 ntBASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ARTN-206ENST00000472435 402 ntTSL 3 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 PNN-202ENST00000553331 656 ntTSL 3 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 GGTLC5P-201ENST00000617623 998 ntBASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 AC004706.3-202ENST00000621574 984 ntBASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 AP005117.1-201ENST00000584346 1413 ntBASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
SLIRPQ9GZT3 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms