Protein–RNA interactions for Protein: Q9GZM3

POLR2J2, DNA-directed RNA polymerase II subunit RPB11-b1, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J2Q9GZM3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 AL136982.4-201ENST00000437689 1740 ntBASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 MKNK2P1-201ENST00000437526 628 ntBASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 AC120114.3-201ENST00000611923 658 ntBASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 AC055717.3-201ENST00000622967 595 ntBASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
POLR2J2Q9GZM3 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC127383.1-201ENST00000444697 1800 ntBASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 LINC01101-201ENST00000622953 1884 ntBASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC112693.3-201ENST00000624819 1983 ntBASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC079140.1-201ENST00000508039 487 ntBASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 SLC25A1P1-201ENST00000528351 927 ntBASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.55□□□□□ -0.08
POLR2J2Q9GZM3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
POLR2J2Q9GZM3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms