Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC091951.1-201ENST00000512854 2465 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 UXT-AS1-201ENST00000590504 1525 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 AL009178.2-201ENST00000597278 2719 ntBASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
FOXP3Q9BZS1 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AKAP8P1-201ENST00000434743 1349 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 SPCS2P4-201ENST00000436160 681 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 RBPMS2P1-201ENST00000437762 623 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 COX20P2-201ENST00000452636 358 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 IGHV3-62-201ENST00000520057 340 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 SPTSSB-204ENST00000617024 1292 ntBASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
FOXP3Q9BZS1 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC018892.3-201ENST00000623986 2499 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC105233.2-201ENST00000523697 349 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AF228730.5-201ENST00000530288 346 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC138761.1-201ENST00000584393 385 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC015911.4-201ENST00000588022 1070 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 AL450472.2-201ENST00000603663 1156 ntBASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.22■□□□□ 0.19
FOXP3Q9BZS1 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms