Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11YQ9BZA8 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 CYP46A4P-201ENST00000414953 267 ntBASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 CHMP1AP1-201ENST00000445563 662 ntBASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.02■□□□□ 0.79
PCDH11YQ9BZA8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AL136309.1-201ENST00000403917 691 ntBASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 RN7SL769P-201ENST00000469386 295 ntBASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 AP001505.2-201ENST00000616815 443 ntBASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11YQ9BZA8 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 ILF3-AS1-201ENST00000591501 1983 ntBASIC20■□□□□ 0.79
PCDH11YQ9BZA8 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 MIR769-201ENST00000390225 118 ntBASIC20■□□□□ 0.79
PCDH11YQ9BZA8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 SPTLC1P5-201ENST00000450718 252 ntBASIC20■□□□□ 0.79
PCDH11YQ9BZA8 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 IMP3P2-201ENST00000489760 475 ntBASIC20■□□□□ 0.79
PCDH11YQ9BZA8 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20■□□□□ 0.79
PCDH11YQ9BZA8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11YQ9BZA8 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms