Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SDHD-202ENST00000525291 790 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 KLK3-207ENST00000595952 969 ntTSL 3 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDH11XQ9BZA7 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 CYP46A4P-201ENST00000414953 267 ntBASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 CHMP1AP1-201ENST00000445563 662 ntBASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 HCG18-245ENST00000602550 559 ntTSL 4 BASIC20.02■□□□□ 0.79
PCDH11XQ9BZA7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AL136309.1-201ENST00000403917 691 ntBASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 RN7SL769P-201ENST00000469386 295 ntBASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 AP001505.2-201ENST00000616815 443 ntBASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDH11XQ9BZA7 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 ILF3-AS1-201ENST00000591501 1983 ntBASIC20■□□□□ 0.79
PCDH11XQ9BZA7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 MIR769-201ENST00000390225 118 ntBASIC20■□□□□ 0.79
PCDH11XQ9BZA7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 SPTLC1P5-201ENST00000450718 252 ntBASIC20■□□□□ 0.79
PCDH11XQ9BZA7 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 IMP3P2-201ENST00000489760 475 ntBASIC20■□□□□ 0.79
PCDH11XQ9BZA7 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC20■□□□□ 0.79
PCDH11XQ9BZA7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PCDH11XQ9BZA7 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms